SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800685
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:150362474-150370267
Size: 7793
Super-enhancer rank 685
Number of SE elements: 2
ChIP density(Case|Control): 43345.4453|1692.6396
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPRD2 ;
ROSE Overlap RPRD2 ;
ROSE Proximal PRPF3 ; RPRD2 ;
ROSE Closest RPRD2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C1orf54 ; APH1A ; PRPF3 ; MRPS21 ; CIART ; RPRD2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800685 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers