SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800683
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:38707341-38736694
Size: 29353
Super-enhancer rank 683
Number of SE elements: 9
ChIP density(Case|Control): 49060.6042|7388.1501
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CAPN12 ;
ROSE Overlap CAPN12 ; ACTN4 ;
ROSE Proximal LGALS7 ;
ROSE Closest CAPN12 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LGALS4 ; ACTN4 ; LGALS7B ; CAPN12 ; LGALS7 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800683 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers