SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800667
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr17:39617617-39634227
Size: 16610
Super-enhancer rank 667
Number of SE elements: 3
ChIP density(Case|Control): 45127.709|2421.738
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP1R1B ;
ROSE Overlap PPP1R1B ;
ROSE Proximal NEUROD2 ; PNMT ; TCAP ; STARD3 ;
ROSE Closest PPP1R1B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ERBB2 ; PGAP3 ; PNMT ; NEUROD2 ; STARD3 ; PPP1R1B ; TCAP ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800667 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers