SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800665
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:155078841-155094705
Size: 15864
Super-enhancer rank 665
Number of SE elements: 2
ChIP density(Case|Control): 46432.3416|3379.032
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EFNA3 ;
ROSE Overlap EFNA3 ;
ROSE Proximal EFNA1 ; EFNA4 ; SLC50A1 ; DCST2 ; LOC100505666 ; DPM3 ; ADAM15 ; DCST1 ;
ROSE Closest EFNA3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ADAM15 ; KRTCAP2 ; EFNA1 ; TRIM46 ; SLC50A1 ; DCST1 ; LOC100505666 ; DCST2 ; DPM3 ; ZBTB7B ; EFNA4 ; LENEP ; EFNA3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800665 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers