SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800651
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr3:127588584-127593262
Size: 4678
Super-enhancer rank 651
Number of SE elements: 1
ChIP density(Case|Control): 44349.3112|882.7386
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TPRA1 ;
ROSE Overlap TPRA1 ;
ROSE Proximal MCM2 ; MIR7976 ; PODXL2 ; MIR6825 ; TPRA1 ;
ROSE Closest TPRA1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR6825 ; TPRA1 ; MIR7976 ; PODXL2 ; ABTB1 ; LINC01471 ; MCM2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800651 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers