SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800635
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr8:124472940-124479607
Size: 6667
Super-enhancer rank 635
Number of SE elements: 2
ChIP density(Case|Control): 46330.9831|2104.1052
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF139 ;
ROSE Overlap RNF139 ; RNF139-AS1 ;
ROSE Proximal MIR6844 ; TRMT12 ;
ROSE Closest RNF139 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NDUFB9 ; RNF139-AS1 ; TATDN1 ; RNF139 ; MIR6844 ; TRMT12 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800635 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers