SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800619
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:6719195-6725606
Size: 6411
Super-enhancer rank 619
Number of SE elements: 1
ChIP density(Case|Control): 45682.8627|623.1492
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C3 ;
ROSE Overlap C3 ;
ROSE Proximal TRIP10 ; GPR108 ; SH2D3A ; MIR6791 ; VAV1 ; TNFSF14 ;
ROSE Closest C3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TRIP10 ; TNFSF14 ; VAV1 ; MIR6791 ; C3 ; GPR108 ; SH2D3A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800619 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers