SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800612
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr9:137605654-137614281
Size: 8627
Super-enhancer rank 612
Number of SE elements: 2
ChIP density(Case|Control): 46710.0288|1412.2399
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ARRDC1 ;
ROSE Overlap ARRDC1 ;
ROSE Proximal ARRDC1-AS1 ; ZMYND19 ; DPH7 ; EHMT1 ;
ROSE Closest ARRDC1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA EHMT1 ; ZMYND19 ; ARRDC1-AS1 ; ARRDC1 ; PNPLA7 ; MRPL41 ; DPH7 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800612 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers