SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800588
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:202562068-202600173
Size: 38105
Super-enhancer rank 588
Number of SE elements: 12
ChIP density(Case|Control): 54612.086|7727.694
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP1R12B ;
ROSE Overlap SYT2 ; PPP1R12B ;
ROSE Proximal ;
ROSE Closest PPP1R12B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PPP1R12B ; SYT2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800588 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers