SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800582
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr3:185536267-185559689
Size: 23422
Super-enhancer rank 582
Number of SE elements: 8
ChIP density(Case|Control): 51369.1304|4192.538
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LIPH ;
ROSE Overlap LIPH ;
ROSE Proximal TMEM41A ; SENP2 ;
ROSE Closest LIPH ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMEM41A ; LIPH ; SENP2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800582 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers