SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800562
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:45439616-45485884
Size: 46268
Super-enhancer rank 562
Number of SE elements: 8
ChIP density(Case|Control): 50755.996|2628.0224
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FOSB ;
ROSE Overlap RTN2 ; FOSB ;
ROSE Proximal CD3EAP ; VASP ; PPP1R13L ; PPM1N ; ERCC1 ; MIR6088 ;
ROSE Closest FOSB ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ERCC1 ; PPP1R13L ; MIR6088 ; VASP ; FOSB ; CD3EAP ; PPM1N ; RTN2 ; ERCC2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800562 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers