SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800558
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:1244522-1267333
Size: 22811
Super-enhancer rank 558
Number of SE elements: 10
ChIP density(Case|Control): 49308.2576|930.6888
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIDN ;
ROSE Overlap ATP5D ; MIDN ;
ROSE Proximal C19orf24 ; CIRBP ; CIRBP-AS1 ; STK11 ; CBARP ; EFNA2 ;
ROSE Closest MIDN ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MUM1 ; C19orf26 ; CIRBP ; ATP5D ; EFNA2 ; CIRBP-AS1 ; C19orf24 ; STK11 ; SBNO2 ; MIDN ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800558 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers