SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800545
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr11:64841231-64888361
Size: 47130
Super-enhancer rank 545
Number of SE elements: 11
ChIP density(Case|Control): 54303.186|4887.381
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EHD1 ;
ROSE Overlap CDC42BPG ; EHD1 ;
ROSE Proximal GPHA2 ; ATG2A ; MEN1 ; MAP4K2 ; PPP2R5B ; MIR6749 ; MIR192 ; MIR6750 ; MIR194-2 ;
ROSE Closest EHD1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CDC42BPG ; MAP4K2 ; MIR192 ; MEN1 ; SF1 ; EHD1 ; MIR6749 ; PPP2R5B ; MIR194-2 ; GPHA2 ; MIR6750 ; ATG2A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800545 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers