SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800516
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr8:142724577-142739990
Size: 15413
Super-enhancer rank 516
Number of SE elements: 3
ChIP density(Case|Control): 54793.215|3766.9372
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: THEM6 ;
ROSE Overlap LOC100288181 ; THEM6 ;
ROSE Proximal LYNX1 ; LY6D ; LY6K ; LYPD2 ; PSCA ; SLURP1 ;
ROSE Closest THEM6 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SLURP1 ; PSCA ; THEM6 ; LYNX1 ; JRK ; LYPD2 ; LY6K ; LY6D ; LOC100288181 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800516 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers