SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800509
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr20:33714043-33735468
Size: 21425
Super-enhancer rank 509
Number of SE elements: 3
ChIP density(Case|Control): 54481.6325|3175.185
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF341 ;
ROSE Overlap PXMP4 ; ZNF341 ;
ROSE Proximal E2F1 ; NECAB3 ; ACTL10 ; ZNF341 ;
ROSE Closest PXMP4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ZNF341-AS1 ; NECAB3 ; E2F1 ; ZNF341 ; ACTL10 ; PXMP4 ; C20orf144 ; CHMP4B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800509 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers