SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800475
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:153962200-153968919
Size: 6719
Super-enhancer rank 475
Number of SE elements: 1
ChIP density(Case|Control): 54972.8423|1646.8269
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC39A1 ;
ROSE Overlap SLC39A1 ; CREB3L4 ; MIR6737 ;
ROSE Proximal CRTC2 ; RAB13 ; DENND4B ; JTB ; CREB3L4 ; RPS27 ; GATAD2B ;
ROSE Closest SLC39A1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR6737 ; CRTC2 ; SLC39A1 ; RPS27 ; RAB13 ; CREB3L4 ; JTB ; DENND4B ; GATAD2B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800475 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers