SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800471
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr21:41701392-41709814
Size: 8422
Super-enhancer rank 471
Number of SE elements: 1
ChIP density(Case|Control): 54620.881|1049.3812
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC00479 ;
ROSE Overlap ;
ROSE Proximal LINC00111 ; MIR6814 ; LINC00479 ; LINC00112 ;
ROSE Closest LINC00479 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR6814 ; RIPK4 ; LINC00112 ; LINC00111 ; LINC00479 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800471 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers