SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800467
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr7:23463285-23482084
Size: 18799
Super-enhancer rank 467
Number of SE elements: 3
ChIP density(Case|Control): 55423.2118|1725.7482
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IGF2BP3 ;
ROSE Overlap IGF2BP3 ;
ROSE Proximal TRA2A ; RPS2P32 ;
ROSE Closest IGF2BP3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TRA2A ; IGF2BP3 ; RPS2P32 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800467 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers