SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800464
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:94854288-94885542
Size: 31254
Super-enhancer rank 464
Number of SE elements: 6
ChIP density(Case|Control): 59285.7126|5322.5562
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC44A3 ;
ROSE Overlap SLC44A3 ;
ROSE Proximal CNN3 ; SLC44A3 ; LINC01057 ; LOC729970 ;
ROSE Closest SLC44A3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SLC44A3 ; LINC01057 ; CNN3 ; LOC729970 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800464 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers