SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800457
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr2:110442558-110460949
Size: 18391
Super-enhancer rank 457
Number of SE elements: 3
ChIP density(Case|Control): 57221.7574|2828.5358
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC01106 ;
ROSE Overlap LIMS3-LOC440895 ; LIMS3L ;
ROSE Proximal ;
ROSE Closest LINC01106 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC01123 ; LIMS3L ; LOC440895 ; LOC100288570 ; LINC01106 ; LIMS3 ; LIMS3-LOC440895 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800457 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers