SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800415
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:94708612-94804347
Size: 95735
Super-enhancer rank 415
Number of SE elements: 16
ChIP density(Case|Control): 72758.6|14724.043
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR378G ;
ROSE Overlap LINC01057 ; MIR378G ;
ROSE Proximal SLC44A3 ;
ROSE Closest MIR378G ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SLC44A3 ; LINC01057 ; MIR378G ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800415 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers