SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800400
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr21:34542739-34554600
Size: 11861
Super-enhancer rank 400
Number of SE elements: 4
ChIP density(Case|Control): 60724.7617|1429.2505
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RCAN1 ;
ROSE Overlap RCAN1 ;
ROSE Proximal RCAN1 ; KCNE1 ;
ROSE Closest RCAN1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KCNE1 ; RCAN1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800400 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers