SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800369
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:10591264-10627170
Size: 35906
Super-enhancer rank 369
Number of SE elements: 9
ChIP density(Case|Control): 67338.1124|5673.148
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC44A2 ;
ROSE Overlap SLC44A2 ;
ROSE Proximal ILF3-AS1 ; AP1M2 ; CDKN2D ; ILF3 ; ATG4D ; MIR1238 ; KRI1 ;
ROSE Closest SLC44A2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA AP1M2 ; MIR1238 ; S1PR5 ; ATG4D ; CDKN2D ; SLC44A2 ; ILF3 ; QTRT1 ; ILF3-AS1 ; KRI1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800369 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers