SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800360
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr9:128058939-128100545
Size: 41606
Super-enhancer rank 360
Number of SE elements: 14
ChIP density(Case|Control): 70289.1764|7385.065
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC25A25 ;
ROSE Overlap NAIF1 ; SLC25A25 ;
ROSE Proximal PTGES2-AS1 ; SLC25A25 ; SLC25A25-AS1 ; LCN2 ; PTGES2 ;
ROSE Closest SLC25A25 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PTGES2 ; NAIF1 ; SLC25A25 ; C9orf16 ; FAM102A ; SLC25A25-AS1 ; LCN2 ; PTGES2-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800360 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers