SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800319
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr5:172402680-172456614
Size: 53934
Super-enhancer rank 319
Number of SE elements: 16
ChIP density(Case|Control): 78171.9396|8742.7014
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SH3PXD2B ;
ROSE Overlap SH3PXD2B ;
ROSE Proximal ;
ROSE Closest SH3PXD2B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SH3PXD2B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800319 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers