SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800318
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:212463727-212489293
Size: 25566
Super-enhancer rank 318
Number of SE elements: 5
ChIP density(Case|Control): 73855.0608|4246.5126
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NENF ;
ROSE Overlap ;
ROSE Proximal TMEM206 ; NENF ;
ROSE Closest NENF ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMEM206 ; ATF3 ; NENF ; LOC101929565 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800318 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers