SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800303
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:38263286-38302502
Size: 39216
Super-enhancer rank 303
Number of SE elements: 8
ChIP density(Case|Control): 80706.528|9800.0784
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SPINT2 ;
ROSE Overlap SPINT2 ;
ROSE Proximal DPF1 ; C19orf33 ; KCNK6 ; CATSPERG ; YIF1B ; PPP1R14A ;
ROSE Closest SPINT2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KCNK6 ; YIF1B ; SPINT2 ; C19orf33 ; PSMD8 ; PPP1R14A ; DPF1 ; CATSPERG ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800303 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers