SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800284
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr22:50274227-50307645
Size: 33418
Super-enhancer rank 284
Number of SE elements: 10
ChIP density(Case|Control): 77075.2752|2880.6316
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLXNB2 ;
ROSE Overlap PLXNB2 ;
ROSE Proximal PPP6R2 ; MAPK11 ; TUBGCP6 ; DENND6B ; HDAC10 ; MAPK12 ;
ROSE Closest PLXNB2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HDAC10 ; SELO ; DENND6B ; PPP6R2 ; MAPK12 ; MAPK11 ; TUBGCP6 ; PLXNB2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800284 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers