SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800274
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr17:41545589-41550118
Size: 4529
Super-enhancer rank 274
Number of SE elements: 1
ChIP density(Case|Control): 76899.2497|1232.3409
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC00974 ;
ROSE Overlap LINC00974 ;
ROSE Proximal MIR6510 ; KRT19 ; KRT15 ; KRT9 ; KRT13 ; KRT14 ;
ROSE Closest LINC00974 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KRT19 ; KRT16 ; KRT32 ; KRT14 ; KRT9 ; KRT42P ; MIR6510 ; KRT13 ; LINC00974 ; KRT17 ; KRT15 ; KRT35 ; KRT36 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800274 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers