SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800268
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr3:39121852-39153606
Size: 31754
Super-enhancer rank 268
Number of SE elements: 7
ChIP density(Case|Control): 81134.6454|4820.2572
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR6822 ;
ROSE Overlap TTC21A ; CSRNP1 ; MIR6822 ;
ROSE Proximal GORASP1 ; XIRP1 ; TTC21A ;
ROSE Closest MIR6822 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TTC21A ; GORASP1 ; XIRP1 ; CSRNP1 ; MIR6822 ; WDR48 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800268 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers