SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800256
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr17:47943896-47959518
Size: 15622
Super-enhancer rank 256
Number of SE elements: 4
ChIP density(Case|Control): 80725.1228|2562.008
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRR15L ;
ROSE Overlap PRR15L ; PNPO ;
ROSE Proximal CDK5RAP3 ; SP2-AS1 ; SP2 ;
ROSE Closest PRR15L ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SP6 ; PNPO ; PRR15L ; CDK5RAP3 ; SP2-AS1 ; COPZ2 ; MIR152 ; SP2 ; NFE2L1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800256 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers