SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800226
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:1122310-1166495
Size: 44185
Super-enhancer rank 226
Number of SE elements: 6
ChIP density(Case|Control): 86854.4545|3715.9585
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC01342 ;
ROSE Overlap LINC01342 ;
ROSE Proximal TTLL10 ; RNF223 ; C1orf159 ; TNFRSF18 ; MIR200A ; TNFRSF4 ; MIR429 ; MIR200B ;
ROSE Closest LINC01342 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RNF223 ; SDF4 ; MIR200A ; MIR429 ; MIR200B ; B3GALT6 ; LINC01342 ; C1orf159 ; TTLL10 ; TNFRSF4 ; TNFRSF18 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800226 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers