SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800215
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr6:159690006-159729547
Size: 39541
Super-enhancer rank 215
Number of SE elements: 5
ChIP density(Case|Control): 91019.4279|5559.4646
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SOD2 ;
ROSE Overlap WTAP ; SOD2 ;
ROSE Proximal ACAT2 ; LOC100129518 ;
ROSE Closest SOD2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ACAT2 ; PNLDC1 ; SOD2 ; LOC100129518 ; TCP1 ; SNORA29 ; WTAP ; MRPL18 ; SNORA20 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800215 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers