SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800163
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr12:113189710-113259164
Size: 69454
Super-enhancer rank 163
Number of SE elements: 10
ChIP density(Case|Control): 105340.8818|8271.9714
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TPCN1 ;
ROSE Overlap TPCN1 ; RITA1 ; IQCD ;
ROSE Proximal CCDC42B ; MIR6762 ; DDX54 ; MIR7106 ; TPCN1 ;
ROSE Closest TPCN1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA DDX54 ; RASAL1 ; TPCN1 ; CCDC42B ; MIR6762 ; MIR7106 ; RITA1 ; IQCD ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800163 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers