SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800144
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:35146951-35176553
Size: 29602
Super-enhancer rank 144
Number of SE elements: 5
ChIP density(Case|Control): 112668.1722|9141.0976
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FXYD5 ;
ROSE Overlap FXYD5 ; FXYD7 ;
ROSE Proximal FXYD1 ; FXYD3 ; MIR6887 ; HPN-AS1 ; LGI4 ;
ROSE Closest FXYD5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FXYD1 ; FXYD3 ; LSR ; FXYD7 ; FXYD5 ; FAM187B ; HPN-AS1 ; MIR6887 ; LGI4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800144 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers