Super-enhancer overview
| SE ID: | SE_02_074800132 |
| Species: | Human |
| Data source: | NCBI GEO/SRA |
| Biosample type: | Cell line |
| Tissue type: | Mammary gland |
| Biosample name: | HCC1599_WO |
| Genomic region: | chr12:53985148-54003307 |
| Size: | 18159 |
| Super-enhancer rank | 132 |
| Number of SE elements: | 1 |
| ChIP density(Case|Control): | 108955.8159|2306.193 |
| Genome browser: | 
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Super-enhancer annotation
eQTL
eRNA1~5
5~10
10~MAX
Super-enhancer associated genes
| Strategies/Algorithm | Gene name |
| The closest active: | MIR196A2 ; |
| ROSE Overlap | MIR196A2 ; HOXC9 ; HOXC10 ; HOXC-AS1 ; HOXC-AS2 ; HOXC-AS3 ; |
| ROSE Proximal | HOXC12 ; HOTAIR ; HOXC4 ; HOXC11 ; HOXC13 ; HOXC6 ; HOXC8 ; HOXC13-AS ; HOXC5 ; MIR615 ; |
| ROSE Closest | MIR196A2 ; |
| Lasso | ; |
| PreSTIGE | ; |
| ABC | ; |
| BETA | HOXC4 ; HOXC6 ; HOXC-AS3 ; LOC100240735 ; HOXC13-AS ; HOTAIR ; HOXC5 ; FLJ12825 ; HOXC11 ; HOXC-AS2 ; HOXC-AS1 ; HOXC8 ; HOXC10 ; HOXC9 ; MIR615 ; MIR196A2 ; HOXC13 ; HOXC12 ; |