SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800123
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:38847794-38865700
Size: 17906
Super-enhancer rank 123
Number of SE elements: 6
ChIP density(Case|Control): 113414.8134|3941.1106
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HNRNPL ;
ROSE Overlap HNRNPL ;
ROSE Proximal ECH1 ; NFKBIB ; SIRT2 ; RINL ; LGALS4 ; CCER2 ;
ROSE Closest HNRNPL ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NFKBIB ; LGALS4 ; FBXO17 ; RINL ; SIRT2 ; ECH1 ; LGALS7B ; CCER2 ; HNRNPL ; LGALS7 ; SARS2 ; MRPS12 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800123 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers