SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800117
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:151187373-151211998
Size: 24625
Super-enhancer rank 117
Number of SE elements: 8
ChIP density(Case|Control): 117702.575|5614.5
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PIP5K1A ;
ROSE Overlap VPS72 ; PIP5K1A ;
ROSE Proximal PIP5K1A ; PSMD4 ; TNFAIP8L2-SCNM1 ; SCNM1 ; LYSMD1 ; TMOD4 ; SEMA6C ; VPS72 ;
ROSE Closest PIP5K1A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PIP5K1A ; ZNF687 ; SCNM1 ; VPS72 ; SEMA6C ; TNFAIP8L2-SCNM1 ; LYSMD1 ; TNFAIP8L2 ; PSMD4 ; TMOD4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800117 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers