SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800086
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr3:194129471-194185823
Size: 56352
Super-enhancer rank 86
Number of SE elements: 12
ChIP density(Case|Control): 134827.7952|7861.104
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HES1 ;
ROSE Overlap HES1 ;
ROSE Proximal LOC100505920 ;
ROSE Closest HES1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC100505920 ; HES1 ; LOC101929337 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800086 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers