SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800074
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:40420529-40446879
Size: 26350
Super-enhancer rank 74
Number of SE elements: 4
ChIP density(Case|Control): 145997.445|9180.34
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SERTAD1 ;
ROSE Overlap SERTAD1 ; SERTAD3 ;
ROSE Proximal SPTBN4 ; PRX ; BLVRB ; HIPK4 ;
ROSE Closest SERTAD1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C19orf47 ; MIR6796 ; PRX ; PLD3 ; SERTAD3 ; SERTAD1 ; SPTBN4 ; HIPK4 ; BLVRB ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800074 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers