SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800072
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr8:38360009-38411965
Size: 51956
Super-enhancer rank 72
Number of SE elements: 13
ChIP density(Case|Control): 149809.9304|12744.8068
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LETM2 ;
ROSE Overlap WHSC1L1 ; FGFR1 ; LETM2 ;
ROSE Proximal ;
ROSE Closest LETM2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LETM2 ; FGFR1 ; WHSC1L1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800072 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers