SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800064
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:13142966-13181933
Size: 38967
Super-enhancer rank 64
Number of SE elements: 9
ChIP density(Case|Control): 153720.9183|6133.4058
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IER2 ;
ROSE Overlap IER2 ; STX10 ;
ROSE Proximal LYL1 ; TRMT1 ; NACC1 ;
ROSE Closest IER2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA STX10 ; TRMT1 ; IER2 ; LYL1 ; NACC1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800064 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers