SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800063
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr19:2476149-2580279
Size: 104130
Super-enhancer rank 63
Number of SE elements: 21
ChIP density(Case|Control): 154018.683|5664.672
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GADD45B ;
ROSE Overlap GADD45B ; GNG7 ;
ROSE Proximal TIMM13 ; MIR7108 ; LMNB2 ;
ROSE Closest GADD45B ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LMNB2 ; MIR7108 ; GADD45B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800063 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers