SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800034
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:225872759-225919951
Size: 47192
Super-enhancer rank 34
Number of SE elements: 8
ChIP density(Case|Control): 210655.6496|7975.448
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LEFTY1 ;
ROSE Overlap PYCR2 ; TMEM63A ; LEFTY1 ;
ROSE Proximal EPHX1 ; LEFTY2 ; PYCR2 ; MIR6741 ;
ROSE Closest LEFTY1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA EPHX1 ; TMEM63A ; PYCR2 ; LEFTY2 ; LEFTY1 ; MIR6741 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800034 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers