SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800033
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr2:70882527-70931377
Size: 48850
Super-enhancer rank 33
Number of SE elements: 8
ChIP density(Case|Control): 212297.215|9388.97
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VAX2 ;
ROSE Overlap VAX2 ; LINC01143 ;
ROSE Proximal ATP6V1B1-AS1 ; ATP6V1B1 ; ANKRD53 ; CD207 ;
ROSE Closest VAX2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ATP6V1B1-AS1 ; VAX2 ; ANKRD53 ; ATP6V1B1 ; CLEC4F ; LINC01143 ; CD207 ; TEX261 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800033 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers