SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074800013
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr1:202005486-202065487
Size: 60001
Super-enhancer rank 13
Number of SE elements: 12
ChIP density(Case|Control): 322055.3675|11628.1938
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ELF3 ;
ROSE Overlap RNPEP ; ELF3 ;
ROSE Proximal TIMM17A ; ELF3 ; MIR6740 ;
ROSE Closest ELF3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RNPEP ; MIR6740 ; TIMM17A ; ELF3 ; GPR37L1 ; LMOD1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800013 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers