SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074800002
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: HCC1599_WO
Genomic region: chr8:116900621-116947093
Size: 46472
Super-enhancer rank 2
Number of SE elements: 5
ChIP density(Case|Control): 455123.532|11520.4088
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AARD ;
ROSE Overlap AARD ;
ROSE Proximal SLC30A8 ; RAD21 ; MIR3610 ; RAD21-AS1 ;
ROSE Closest AARD ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SLC30A8 ; AARD ; MIR3610 ; RAD21 ; RAD21-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074800002 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers