SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074000960
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Muscle
Biosample name: RH3
Genomic region: chr17:68506813-68511798
Size: 4985
Super-enhancer rank 960
Number of SE elements: 3
ChIP density(Case|Control): 22354.734|932.6935
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRKAR1A ;
ROSE Overlap PRKAR1A ;
ROSE Proximal WIPI1 ; PRKAR1A ; FAM20A ;
ROSE Closest PRKAR1A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA WIPI1 ; PRKAR1A ; FAM20A ; MIR635 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074000960 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers