SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_074000779
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Muscle
Biosample name: RH3
Genomic region: chr1:31215868-31236780
Size: 20912
Super-enhancer rank 779
Number of SE elements: 11
ChIP density(Case|Control): 27428.1792|2139.2976
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NKAIN1 ;
ROSE Overlap NKAIN1 ;
ROSE Proximal ;
ROSE Closest NKAIN1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ZCCHC17 ; NKAIN1 ; SNRNP40 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074000779 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers