SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_074000394
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Muscle
Biosample name: RH3
Genomic region: chr13:28697844-28754632
Size: 56788
Super-enhancer rank 394
Number of SE elements: 14
ChIP density(Case|Control): 47332.798|7229.1124
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC46A3 ;
ROSE Overlap RNU6-53P ; SLC46A3 ;
ROSE Proximal SLC46A3 ; POMP ;
ROSE Closest SLC46A3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RNU6-53P ; SLC46A3 ; POMP ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_074000394 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers